Results for "Single"
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...scaffold-builder and comprises two modules: i) the interative_scaffold_extender, which works with big, unambiguous contigs, or when they run out, single copy contigs, and ii) the sm...2853 days ago
- Microbiome analysis using a single application MEGAN6 is a comprehensive toolbox for interactively analyz...Why use MEGAN6? The software is: Easy to use. MEGAN6 is a single application and all features...
2841 days ago
- ...variations in sequencing depth, read lengths and mixtures of paired and single-end reads. A minimum of 20 to...more genomes provide better results.To run discovery or genotyping on a single sequenced genome or a small s...
2799 days ago
- ...owering R-chie, available for download and local use for more customized figures and scripting. http://www.e-rna.org/r-chie/plot.cgi?eg=single
2803 days ago
- ...or 8 mammals in 21 CPU hours (42 wall minutes)) scalable (Arbitrarily parallelizable across multiple nodes using MPI) memory efficient. (Even a single node with 16GB of ram can han...
2774 days ago
- ...are reported from traditional cytogenetic coordinates down to the actual base pair positions. Furthermore, multiple rearrangements in a single area of the genome can make c...
2773 days ago
- ...om large recalibrated sequencing data. ART can also simulate reads using user own read error model or quality profiles. ART supports simulation of single-end, paired-end/mate-pair rea...
2740 days ago
- ...te putative paralogs, and calculate sequencing depth. For more information, please see our wiki. HybPiper is run separately for each sample (single or paired-end sequence reads)...
2739 days ago
- Background. Next-generation sequencing technologies are now producing multiple times the genome size in total reads from a single experiment. This is enough information to reconstruct...
2718 days ago
- ...ns types (ITS or 16S). If WGS are chosen, then bipype finds the SA coordinates of the input reads and generates alignments in the SAM format given single-end reads, aligns reads to re...
2712 days ago
