Results for "Single Cell"

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  • BUSCO: Assessing genome assembly and annotation completeness with Benchmarking Universal Single-Copy Orthologs

    High-throughput genomics has revolutionized biological research, however, while the nu...ed expectations of gene content from near-universal single-copy orthologs selected from&...ive lineage-specific sets of Benchmarking Universal Sing...

    2927 days ago

  • BioDBnet

    Database to Database Conversions db2db allows for conversions of identifiers from one database to other database i...y depending on the number of outputs and the options selected. Conversions to a sing...

    2904 days ago

  • GAEMR

    The Genome Assembly Evaluation Metrics and Reporting (GAEMR) pa...egrated modules. These modules can be executed as a single program to generate a complet...es to Binary Alignment Map (BAM) format, allowing a sing...

    2892 days ago

  • WiseScaffolder

    Function WiseScaffolder is a stand-alone semi-automatic application for genome scaffolding of pre-assembled contigs...fold_extender, which works with big, unambiguous contigs, or when they run out, sing...

    2863 days ago

  • MEGAN6

    Microbiome analysis using a single application MEGAN6 is a comprehensive toolbox for interactively analyzing microb...of input Why use MEGAN6?  The software is: Easy to use. MEGAN6 is a sing...

    2851 days ago

  • Genome STRiP

    Genome STRiP (Genome STRucture In Populations) is a suite of tools for discovering...cing depth, read lengths and mixtures of paired and single-end reads. A minimum of 20 to...better results.To run discovery or genotyping on a sing...

    2808 days ago

  • R-chie

    R-chie allows you to make arc diagrams of RNA secondary structures, allowing for easy comparison and overlap of...more customized figures and scripting. http://www.e-rna.org/r-chie/plot.cgi?eg=sing...

    2813 days ago

  • Murasaki

    Murasaki is an anchor alignment program that is exteremely fast (17 CPU hours for whole Human x Mouse genome (wit...rily parallelizable across multiple nodes using MPI) memory efficient. (Even a sing...

    2784 days ago

  • COSMIC

    The accurate description and annotation of structural variants can be complex.  This is due to the different re...the actual base pair positions. Furthermore, multiple rearrangements in a sing...

    2782 days ago

  • Ribbon !!

    Visualization has played an extremely important role in th...we show a gene fusion in the SK-BR-3 breast cancer cell line linking the genes CYTH1...genes (Figure 1a). More gene fusions of this cancer cell line are investigated in Supp...

    2763 days ago