3932 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...s and alternate splicing from RNA-Seq data http://cbil.upenn.edu/beers/BOTTLENECK Bottleneck is a program for detecting recent effective population size reductions from allele data f...3749 days ago
List of In-silico Binding Site Prediction Tools
...a nifty druggability prediction score has been added to fpocket recently. As the algorithm is very fast it can be used on a large scale level (PDB size for instance). If you use fpo...3756 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis, some of them are as follows Biostrings The Biostrings package from Bioconductor provides a...3636 days ago
Commercial and public next-gen-seq (NGS) software
...hat of Solexa/Illumina) back to a genome of any size. It seeks to align reads from...ul for assembling genomes up to 40-50 Mbases in size. The parallel version is impl...shorter than sonication or library construction size estimates, and uses it to imp...3531 days ago
Software packages for next gen sequence analysis
...hat of Solexa/Illumina) back to a genome of any size. It seeks to align reads from...ul for assembling genomes up to 40-50 Mbases in size. The parallel version is impl...shorter than sonication or library construction size estimates, and uses it to imp...3254 days ago
Comprehensive list of visualization tools for biological pathways
The study of biological pathways is a key to understand the different processes inside a cell: proteins exert their function not in isolation but in a tightly controll...2299 days ago
2886 days ago
Genome Assembly Tools and Software - PART1 !!
...cking a set of trajectories of items with their sizes representing coverage of the...nger, 454). KmerGenie 1.6982 – K-mer size Selection for Genome Assembly...na sequenced Pair-End reads of which the insert size is smaller than the sum of th...2697 days ago
Perl Special Vars Quick Reference
$_ The default or implicit variable. @_ Subroutine parameters. $a$b sort comparison routine variables. @ARGV The command-line args....2656 days ago