Results for "Sizes"
Bio-Scripts
Install Parrot Virtual Machine !
...les should be compiled in..............done. auto::headers - Probe for C headers................................done. auto::sizes - Determine some sizes.................................1551 days ago
Bash script to get intergenic region from genome files !
...will require the size of the chromosomes. wget http://xxx.chrom.sizes cat xxx.chrom.sizes | sed 's/^chr//' | sed 's/Cp/...\t";} $3=="gene" {print $1,$4-1,$5}' | bedtools sort -g xxx.chrom.sizes | bedtools complement -i std...1379 days ago
Tadpole is 250x faster than SPADes assembler !
...perform error correction. correct: Error correct only. insert: Measure insert sizes. discard...990 days ago
Identify genome-wide synteny with LASTZ alignment
...rmat=axt --out=chr01.axt axtChain -linearGap=medium chr01.axt AAChr1.txt FFChr1.txt chr01.axt.chain chainPreNet chr01.axt.chain AAChr1.txt.sizes FFChr1.txt.sizes chr01.chain.filter chainNet c...531 days ago
