BOL: Results for "Snakemake"

Results for "Snakemake"

- Surabhi Chaudhary@surabhi
Download with Snakemake !
# list sample names & download URLs. sample_links = {"ERR458493": "https://osf.io/5daup/download", "ERR458494":"https://osf.io/8rvh5/download",...
1526 days ago
- biogeek@biogeek
Install snakemake and activate on conda
$ conda create -c bioconda -c conda-forge -n snakemake snakemake $ conda activate snakemake
1548 days ago
- Abhinav@abhinav
Rules to run fastp / Snakemake !
rule fastp: input: fwd=INPUT + "/{sample}-read_1.fq", rev=INPUT + "/{sample}-read_2.fq" output: fwd=RESULTS + "/fastq_trimmed/{sampl...
912 days ago