RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
...aeal genomes. It works by offering a standard software pipeline for identifying geno...notation pipelines. RASTtk offers a choice of software for identifying and annotatin...or batch submissions. This is the first major software restructuring of RAST since i...2924 days ago
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Kraken: ultrafast metagenomic sequence classification using exact alignments
...e, 909 times faster than Megablast and 11 times faster than the abundance estimation program MetaPhlAn. Kraken is available at http://ccb.jhu.edu/software/kraken/. Krona https://sour...2863 days ago
Bioinformatics tools and software
USEARCH >Extreme high-throughput sequence analysis. Orders of magnitude faster than BLAST. MUSCLE >Multiple sequence alignment. Faster and more accurate than...2855 days ago