2617 days ago
Prokka: tool for the rapid annotation of prokaryotic genomes
Prokka is a software tool for the rapid annotation of prokaryotic genomes. A typical 4 Mbp genome can be fully annotated in less than 10 minutes on a quad-core computer, and s...2614 days ago
2614 days ago
CONCOCT: Clustering cONtigs with COverage and ComposiTion
...ultiple samples and linkage data from paired end reads. Warning! This software is to be considered under dev...nge significantly from one version to another. If you want to use this software, please stay up to date with...2614 days ago
Pacbio Long Reads Compatible Software and Tools
The following software packages are known to be compatible with PacBio® data, in a...date license information. A separate page lists commercial software. Know of any other open source software for PacBio data? Email u...2605 days ago
gbtools: Interactive Visualization of Metagenome Bins in R
We have developed gbtools, a software package that allows users to visualize metagenomic assemblies by plotting coverage (sequencing depth) and GC values of contigs, and also to annot...2594 days ago
WGS Celera Assembler version 8.3rc2
...tribution package provides a stable, tested, documented version of the software. The distribution is us...[http://samtools.sourceforge.net/ SAMtools], [http://www.cbcb.umd.edu/software/jellyfish/ Jellyfish 2.0], [h...2579 days ago
DeCoSTAR - Detection of Co-evolution
DeCoSTAR is a software which aims at reconstructing ancestral gene or genome organizations, in th...es of adjacencies, and contains in particular all the features of previous software DeCo, DeCoLT, ArtDeCo and DeC...2575 days ago
ChromHMM: Chromatin state discovery and characterization
ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate m...ons that can be directly visualized in a genome browser. ChromHMM software v1.12 (version log) Chr...2570 days ago
2562 days ago