DeCoSTAR - Detection of Co-evolution
DeCoSTAR is a software which aims at reconstructing ancestral gene or genome organizations, in the form of sets of...ages of adjacencies, and contains in particular all the features of previous software DeC...2593 days ago
ChromHMM: Chromatin state discovery and characterization
ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin da...tions that can be directly visualized in a genome browser. ChromHMM software v1....2588 days ago
2580 days ago
2575 days ago
A Post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs
PAGIT addresses the need for software to generate high quality draft genomes. It is based on a series of programs t...nome, or an earlier assembly, onto the latest assembly. PAGIT bundles these software and...2564 days ago
CABOG: Celera Assembler with Best Overlap Graph
CABOG (Celera Assembler with Best Overlap Graph) is scientific software for DNA research. CABOG ha...tension of the Celera Assembler software that was originally developed...raft human genome sequence. The software was released to the public do...ing a jigsaw puzzle. The CABOG software was...2562 days ago
ANGES: reconstructing ANcestral GEnomeS maps
This page contains the software ANGES 1.01, that aims at reconstucting ancestral genome maps from homologous markers in extant related genomes. Download Program, versi...2559 days ago
Pollux: platform independent error correction of single and mixed genomes
Pollux: General-purpose error corrector that corrects errors introduced by Illumina, Ion Torrent, and Roche 454 seq...show that the quality of assemblies improves when reads are corrected by our software. h...2558 days ago
SuRankCo: supervised ranking of contigs in de novo assemblies
SuRankCo is a machine learning based software to score and rank contigs from de novo assemblies of next generation sequencing data. It trains with alignments of contigs with...2553 days ago
Genetic-mapper: SVG Genetic Map Drawer
Genetic-mapper is a perl script able to draw publication-ready vectorial genetic maps. Perl script for creating a...an either be submitted for publication and edited with any vectorial drawing software lik...2527 days ago