Results for "Software Development"
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High-throughput genomics has revolutionized biological research, however, while the number of sequenced genomes g...from OrthoDB. BUSCO assessments are implemented in open-source software, w...2936 days ago
- segemehl is a software to map short sequencer reads to reference genomes. Unlike other methods, seg...(ESA). More at http://www.bioinf.uni-leipzig.de/Software/segemehl/ Manual http://www.bioinf.uni-leipzig.de/Software/se...
2936 days ago
- gkno opens the world of complex bioinformatic analysis to people of all level of computational expertise. This site contains documentation, tutorials and information on all the tools that comprise gkno. http://gkno.me/how-to/install.html http://gkno.me/software.html
2925 days ago
- Cytoscape is an open source software platform for visualizing complex networks and integrating these with any type of attribute data. A lot of Apps are available for various kinds of problem domains, including bioinformatics, social network analysis, and semantic web.
2923 days ago
- In a nutshell Anvi’o is an analysis and visualization platform for ‘omic...ithout the help of many people who directly or indirectly contributed to its development. Here is the acknowledgements...
2898 days ago
- Horizontal gene transfer (HGT), the transfer of genetic material between organisms, is crucial for genetic innovati...: The method is publicly available athttp://research.haifa.ac.il/~ssagi/software/ne...
2893 days ago
- Recent studies of the human genome have indicated that regulatory elements (e.g. promote...hese datasets demands integrative and easy-to-use software tools. Moreover, network repr..., integration, and mining. Currently, there is no software th...
2887 days ago
Kraken: ultrafast metagenomic sequence classification using exact alignments
Kraken is an ultrafast and highly accurate program for assigning taxonomic labels to metagenomic DNA sequences. Pre...ance estimation program MetaPhlAn. Kraken is available at http://ccb.jhu.edu/software/kr...2887 days ago
Bioinformatics tools and software
USEARCH >Extreme high-throughput sequence analysis. Orders of magnitude faster than BLAST. MUSCLE >Multiple sequence alignment. Faster and more accurate than C...2880 days ago
- FQC is software that facilitates quality control of FASTQ files by carrying out a QC protocol using FastQC, parsing results, and aggregating quality metrics into an inter...
1291 days ago
