Results for "Source"
Top-level pages
Phylogenetic for Bioinformatics
...ls-intensive can now be done quickly and easily, leading to yet another source of information becoming avail...or additional information on phylogenetics, see list of Phylogenetics Resources on the Internet. Phylogeny...3960 days ago
Best book Titles for Learning Bionformatics
..., Springer Verlag Interpreting Protein Mass Spectra: A Comprehensive Resource , A. Peter Snyder, 2000, Amer...deQC&dq=Pierre+baldi+%2B+bioinformatics&printsec=frontcover&source=bn&hl=en&ei=IoGRS6uCI...3931 days ago
Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration with script
...nd implementation steps at http://dna.cs.byu.edu/bio465/Labs/hmm.shtml Source code with explanation http://...and understand it with graphical version please visit http://www.planet-source-code.com/vb/scripts/ShowCode....3838 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...oftware is called Trinity, and is available on Sourceforge.] Comprehensive analysi...12:4, 2011. Full Text RAD tag sequencing as a source of SNP markers in Cynara card...of software packages, both commercial and open-source, related to analysis of deep...3793 days ago
List of bioinformatics open source projects/software.
...ses that comply with the Open Source Definition.The Open Source In...arning Tutorial (BLT) http://sourceforge.net/projects/biotutorial...onment EMBOSS http://emboss.sourceforge.net/ Suite of packages...g results. supraHex An open-source R/Bioconductor package for om...3770 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...neric simulation software/tools/resource with brief description and ho...etics and genomics. http://egglib.sourceforge.net/EvolSimulator A simu...interactions with n-loci. http://sourceforge.net/projects/gametes/?so...and ReMine http://mendelsaccount.sourceforge.net/MetaSim A tool to ge...3751 days ago
List of In-silico Binding Site Prediction Tools
...raphy of proteins (CASTp) provides an online resource for locating, delineating and...l and functional attributes of proteins. Data, source code, and prediction visualiz...rom the Download tab. fpocket: http://fpocket.sourceforge.net/ fpocket is a very f...3758 days ago
Next generation sequencing in R or bioconductor environment
...maps of genes and genomes Genominator: Tools for storing, accessing, analyzing and visualizing genomic data. To install all packages source("http://bioconductor.org/bioc...3638 days ago
Commercial and public next-gen-seq (NGS) software
...ated by the 1001 Genomes project. Source for POSIX. SlimSearch - Fledg...ance 2 to the query sequence. C++ source. ELAND - Efficient Large-Scal...he University of Washington. C as source. MUMmer - MUMmer is a modular...called Bowtie (http://bowtie-bio.sourceforge.net/) designed for fast...3533 days ago
Software packages for next gen sequence analysis
...ated by the 1001 Genomes project. Source for POSIX. * SlimSearch - Fle...ance 2 to the query sequence. C++ source. * ELAND - Efficient Large-Sc...s for DIP/SNP detection, etc. C++ source * MOSAIK - MOSAIK produces ga...th Genome Sciences Centre. C++ as source. * ALLPATHS - ALLPATHS: De n...3256 days ago
