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Results for "Split-Read"

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• • Jit@jit.aber

  

  Extract list of read ID from bam file: samtools view mbi.sorted.bam |perl -ne '/ID/ && print' > extractedID.sam #Extract #Ids #SAM #BAM #NGS

  3643 days ago

• • Jitendra Narayan@admin

  

  Assemble short reads http://ged.msu.edu/angus/tutorials/short-read-assembly.html #Tutorial #ABySS #Bacteria #Reads #Assembly #Genomics #NGS

  3629 days ago

• • Ram Yash Pal@ramyash

  

  Read excel file and save details to database using php http://webexplorar.com/read-excel-file-and-save-details-to-database-using-php/

  3563 days ago

• • Jit@jit.aber

  

  How to read a phylogenetic tree http://epidemic.bio.ed.ac.uk/how_to_read_a_phylogeny #Phylogeny #Tree

  3497 days ago

• • Jit@jit.aber

  

  #Mapping #sequencing #reads to a #reference #genome with #Bowtie2: a step-by-step guide https://insidedna.me/tutorials/view/how-to-use-bowtie2-read-mapping

  2983 days ago

• • Shruti Paniwala@shruti

  

  Long-read human genome sequencing and its applications https://www.nature.com/articles/s41576-020-0236-x #LongReads #Sequencing #Genome #Review

  1434 days ago

• • Shruti Paniwala@shruti

  

  Rename the fasta name perl -ane 'if(/\>/){$a++; @foo = split /\s+/;$_ = join '_', @foo; print "$_\n"}else{print;}' your.fasta > new.fa #PerlTrick #PerlOneliner #Perl

  2797 days ago

• • Jit@jit.aber

  

  Split the text file with line number in Linux: wc -l abc.txt and then: split -l 60000 abc.txt #Split #Break #Line #Ubuntu #Linux #Tricks

  2789 days ago

• • Shruti Paniwala@shruti

  

  Slice on the fly with perl: my ($username, $real_name) = (split /:/, $str)[0, 4]; #Perl #PerlTrick #Split

  2756 days ago

• • Jit@jit.aber

  

  #Contiguous and #accurate de novo #assembly of #metazoan genomes with modest long read coverage https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gkw654

  2632 days ago

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