Results for "Structural biology"
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Understanding Greedy Algorithms
Learning greedy algo for biologist. https://www.topcoder.com/commun...don/ps/conference/super_biokdd.pdf https://ocw.mit.edu/courses/biology/7-91j-foundations-of-computational-and-systems-biology-spring-2014/lecture-slides/MI...2701 days ago
BIMA V3: an aligner customized for mate pair library sequencing
Summary: Mate pair library sequencing is an effective and economical method for detecting genomic structural variants and chromosomal abnormalities. Unfortunately, the m...red-end read contamination, chimeras, etc.), and presence of structu...2698 days ago
GenomeRing: alignment visualization based on SuperGenome coordinates
The number of completely sequenced genomes is continuously rising, allowing for comparative analyses of genomic variation. Such analyses are often based on whole-genome alignments to elucidate structu...2664 days ago
- Harvest is a suite of core-genome alignment and visualization tools for quickly analyzin...ent and visualization of thousands of intraspecific microbial genomes. Genome Biology, 15 (11), 1-15 [PDF]...
2651 days ago
- The hive plot is a rational visualization method for drawing networks. Nodes are mapped to and positioned on radially distributed linear axes — this mapping is based on network structu...
2635 days ago
PBSuite: Software for Long-Read Sequencing Data from PacBio
PBJelly - the genome upgrading tool. PBHoney - the structural variation discovery tool Both are contained within the PBSuite co...ntra-read discordance and soft-clipped tails of long reads to identify structu...2624 days ago
Pacbio Long Reads Compatible Software and Tools
The following software packages are known to be compatible with PacBio® data, in addition to PacBio's own SMRT®...re for PacBio data? Email us. Software categories: De novo assembly Structu...2607 days ago
- High throughput sequencing (HTS) technologies are being applied to a wide range of important topics in biology. However, the analyses of non...
2587 days ago
ERGO 2.0 Bioinformatics suites
ERGO 2.0 provides a systems biology informatics toolkit centered on comparative genomics to capture, query, and visualize sequenced genomes. Using Igenbio's proprietary algorit...2546 days ago
NCBI Prokaryotic Genome Annotation Pipeline
NCBI Prokaryotic Genome Annotation Pipeline is designed to annotate bacterial and archaeal genomes (chromosomes and pl...ion of protein-coding genes, as well as other functional genome units such as structu...2546 days ago
