Comment on "Sibelia: A comparative genomics tool"
...oose" usually produces fewer blocks, but longer. And it may lose some small synteny blocks (shorter than 15 000 BP), wh...default, Sibelia filters out synteny blocks shorter than 5 000 BP....on "d3" visualization"). The blocks are also can be visualized wit...1301 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
halSynteny program makes it possible to speed up the comput...ions by over two times in comparison with SatsumaSynteny2, another popular tool. Such...g C++. https://phys.org/news/2020-06-scientists-synteny-blocks-animals.html https://github....1427 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
SynChro seems to be the fastest synteny detection tool. http://www.lcq...user-friendly tool to reconstruct synteny blocks between (complex) genomes harboring different levels of synteny conservation. Despite a very...c outputs (notably an interactive synteny map that allows zooming in b...1610 days ago