Genomicus: genome browser that enables users to navigate in genomes in several dimensions
...gate in genomes in several dimensions: linearly along chromosome axes, transversaly across different species, and chronologicaly along evolutionary time. Once a query gene has been...2353 days ago
PLAST: A fast, accurate and NGS scalable bank-to-bank sequence similarity search tool
...s: PLAST is a high-performance sequence comparison tool designed to compare two sets of sequences (query vs. reference), Reduces the processing time of sequences comparisons whil...2340 days ago
Musket: a multistage k-mer spectrum based corrector
...e model and demonstrates superior parallel scalability compared to all other evaluated correctors as well as a highly competitive overall execution time.2335 days ago
mojolicious: a next generation web framework for the Perl programming language.
...idea using bleeding edge technologies. Features An amazing real-time web framework, allowing you t...cket, Comet (long polling), Promises/A+, keep-alive, connection pooling, timeout, cookie, multipart and gzi...2298 days ago
PGAP-X: Extension on pan-genome analysis pipeline
...ualize genomics structure variation, gene distribution with different conservative levels, and genetic variation from pan-genome sight. At the same time, analytical result data from...2287 days ago
Protein Subcellular Localization Prediction
...cidating its interaction partners, function, and potential role(s) in the cellular machinery. Computational tools offer an attractive complement to time-consuming and laborious exper...2250 days ago
NGMLR: long-read mapper designed to align PacBio or Oxford Nanopore
...ter ones to compute precise alignments. The gap model allows ngmlr to account for both the sequencing error and real genomic variations at the same time and makes it especially effec...2195 days ago
MITObim - mitochondrial baiting and iterative mapping
...th this Repo, just to make sure everything is running smoothly on your system. It'll only take a few minutes and will potentially safe you a lot of time down the line. I provide fur...2182 days ago
MCMCTREE: a phylogenetic program for Bayesian estimation of species divergence times
...;is a phylogenetic program for Bayesian estimation of species divergence times using soft fossil constraint...rom dataset of Inoue et al. (2010). Here we conduct a commonly used time estimation method, "Approxima...2157 days ago
npScarf: real-time scaffolder using SPAdes contigs and Nanopore sequencing reads
...gs from a draft genomes to generate sequences that are closer to finish. These pipelines can run on a single laptop for microbial datasets. In real-time mode, it can be integrated wi...2148 days ago