Comment on "Benchmarking Perl Module !"
...ormance of the module in terms of its execution time and memory usage. This can be...nction(); } Run the benchmark: Call the timethese function from the Benchm...ubroutine. Here's an example of how to call the timethese function to run the benc...429 days ago
Comment on "ncbi-datasets-cli -- Quickstart: command line tools !"
.../LATEST/linux-amd64/datasets' % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Tot...ATEST/linux-amd64/dataformat' % Total % Received % Xferd Average Speed Time Time Time Current Dload Uploa...894 days ago
Comment on "Far Manager Commands and Links !"
...ide the left panel F2- show / hide right panel F3- sort by file name F4- sort by extension F5- sort by recording time F6- sort by size F7- do not sort F8- sort by creation time F9- sort by access time F10...954 days ago
Comment on "Basic docker commands !"
Start the docker container docker start [options] container_id Stop the docker container docker stop --time=20 container_id Kill a docker container docker kill [option] container_id986 days ago
Comment on "URMAP, an ultra-fast read mapper"
...essed FASTQ format. It is generally faster to use uncompressed reads because decompression is typically more expensive than the additional file i/o time required to read the larger u...1297 days ago
Comment on "Sibelia: A comparative genomics tool"
..., usage of this set requires more computational time and space and may be not app...he files exist only for a very short period of time, they can be quite big -- ~20...Sibelia" de Bruijn graph is constructed (N + 1) times, where N is the number of s...1299 days ago
Comment on "China’s BGI says it can sequence a genome for just $100"
good news after long time. Illumina monoploy will end soon.1541 days ago
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Comment on "SPAdes hybrid genome assembly"
..., and by default includes read correction. This takes up lots of RAM, so we are going to skip it. We will also only use 3 kmers to save time: ./SPAdes-3.6.2-Linux/bin/...2188 days ago
Comment on "Basic command-line to run BLAST"
...n] mv protein.fa mouse.protein.fa []urbe@urbo214b[Human_vs_Avaga_protein] makeblastdb -in mouse.protein.fa -dbtype prot Building a new DB, current time: 03/14/2018 11:52:20New DB na...2258 days ago