Levenshtein and Damerau-Levenshtein distance !
...Damerau-Levenshtein distance: Damerau-Levenshtein distance It is an extension to Levenshtein Distance, allowing one extra operation: Transposition of two adjacent characte...957 days ago
HTTDB - Horizontally transferred transposable elements database
...and does not contribute to the survival of the host that it inhabits, they are known as selfish genomic parasites. Despite their capacity for transposition inside genomes, they can freq...2300 days ago
fragScaff: Genome Assembly with Contiguity Preserving Transposition
Contiguity preserving transposition and sequencing (CPT-seq) is an entirely in vitro means of generating libraries comprised of 9216 indexed pools, each of which contains thousands o...2190 days ago
Edit distance application in bioinformatics !
...tion, deletion, substitution, and the transposition of two adjacent characte...e Jaro distance allows only transposition. use Text::Levensh...on and substitution, it also considers the transposition of two adjacent characters to...2348 days ago
fragScaff: Genome Assembly with Contiguity Preserving Transposition
Contiguity preserving transposition and sequencing (CPT-seq) is an entirely in vitro means of generating libraries comprised of 9216 indexed pools, each of which contains thousands of sparsely sequenced long fragments ranging from 5 kilobases to >1 megabase. This software, fragScaff, leverages...Tags: fragScaff, Genome, Assembly, Contiguity, Preserving, Transposition, Genome, Assembly
2190 days ago