Results for "UG"
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_A5-miseq_ is a pipeline for assembling DNA sequence data generated on the Illumina sequencing platform. This README will take you through the steps necessary for running _A5-miseq_...2817 days ago
- ...ualization and quality assessment of de novo genome assemblies. In brief, our scripts create Cytoscape files to visualize transcript evidence that suggests adjacency between scaffo...
2811 days ago
- ...pervised training and subsequently generates ab initio gene predictions. AUGUSTUS is a gene finder that us...reads in the prediction step. Complementary strengths of GeneMark-ET and AUGUSTUS provided motivation for...
1951 days ago
- ...torials are written for hundreds of bioinformaticians trying to cope with large volume of next-generation sequencing (NGS) data. NGS technologies brought a dramatic shift in the wor...
2799 days ago
- ...ssembler, fermi tends to produce contigs with slightly longer N50. However, the major weakness of fermi is the high misassembly rate. Although fermi provides a tool to fix...
2795 days ago
Nemo – A stochastic, individual-base, genetically explicit simulation platform
...A new trait coding for (Bateson-)Dobzhansky-Muller incompatibility loci. Multiple haploid or diploid pairs of incompatible loci can be spread throughout the genome and affect ind...2773 days ago
- ...(shown above the table) gives a detailed description of the variant and its location (e.g. chr11:g.36585230_76606619del, a deletion of roughly 40Mb on chromosome 11). Sy...
2773 days ago
- ...hylogenetic and functional information in a network improving the analysis capability. Networks offer a new perspective of organism organization through elements acquired by horizon...
2767 days ago
- ...fusion between these two genes. After SMRT sequencing, Ribbon shows that there are indeed long reads that span from one gene to the other, going through not one but two variants, fo...
2753 days ago
- ...indeed to phasing and imputation in general, we suggest that you start by learnin...the most common IMPUTE2 functions. We suggest that you work through the...use to impute genotypes in your study. Look through a complete list of prog...
2747 days ago
