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Microscope Platform user documentation. The MicroScope platform is available at this URL: https://www.genoscope.cns.fr/agc/microscope2982 days ago
- ...hub.io/Easyfig. Easyfig is a Python application for creating linear comparison figures of multiple genomic loci with an easy-to-use graphical user interface (GUI). More at htt...
2926 days ago
mrFAST: Micro Read Fast Alignment Search Tool
...ference genome with a special emphasis on the discovery of structural variation and segmental duplications. mrFAST maps short reads with respect to user defined error threshold, incl...2929 days ago
- ...we developed a web-based application, QuIN, which enables: 1) building and visualizing chromatin interaction networks, 2) annotating networks with user-provided private and publicly...
2867 days ago
- ...esearcher in choosing phylogenetically specific probes, interpreting microarray results, and aligning/annotating novel sequences. If you are an ARB user, you can use greengenes to ke...
2865 days ago
- ...stributions from data. Scarpa is available free of charge for academic and commercial use under the GNU General Public License (GPL). See the user manual or the paper...
2851 days ago
- ...ile most other scaffolders are closely tied to a specific assembly program, Bambus accepts the output from most current assemblers and provides the user with great flexibility in cho...
2817 days ago
CGView - Circular Genome Viewer
...websites, or as a visualization tool in a sequence annotation pipeline. Users can interact with the genome...viewer written by Paul Stothard. The goal of GView is to provide greater user interaction, and more flexibi...2783 days ago
BLAST Ring Image Generator (BRIG)
...a simple GUI. Contig boundaries and read coverage can be displayed for draft genomes; customized graphs and annotations can be displayed. Using a user-defined set of genes as input...2772 days ago
- ...aps of genomes for comparative purposes. The application aims to let the user examine their data at a varie...built using Java 1.6 and ships with its own JRE, so there is no need for users to install or update Java.
2772 days ago
