Results for "VCF"
Comments
...bsp; Customise the genotype rows printed under the VCF tracks. &nbs...1521 days ago
Comment on "Biological databases !"
NCBI released a set of GATK-specific dbSNP VCF's, with the "chr" attached. Those can be accessed at ftp://ftp.ncbi.nlm.nih.gov/snp/organisms/human_9606/VCF/GATK/.1544 days ago
Comment on "Genome in a Bottle (GIAB) Consortium"
...multiple technologies to generate variant calls and regions for use in benchmarking and validating variant calling pipelines. Currently, benchmark VCF and BED files for small varia...1561 days ago
Comment on "Nanopolis: polish a genome assembly"
...lish.results -P 8 \ nanopolish variants --consensus -o polished.{1}.vcf -w {1} -r reads.fa -b reads.sorted.bam -g draft.fa -t 4 --min-candidate-frequency 0.1 nanopolish vcf2fasta -g draft.fa polished.*....2100 days ago
Comment on "Commercial and public next-gen-seq (NGS) software"
VCF parsing library https://github.com/mendelics/vcf Docs are already on the excellent godoc.org : http://godoc.org/github.com/mendelics/vcf3516 days ago
