Results for "Validate"

Bio-Scripts

  • Downloading GATK !

    ...of quality scores. QualityScoreDistributionSpark (BETA Tool) QualityScoreDistribution on Spark ValidateSamFile (Picard) Validates a SAM or BAM file. View...

    2091 days ago

  • Installing pb-assembly on Linux !

    ...fc_quiver.py fc_unzip.py fc_ctg_link_analysis fc-match fc_rr_ctg_track fc-validate fc_dedup_a_t...

    2050 days ago

  • Install NPM !

    ...el-agent node-underscore node-validate-npm-package-license node-whic...tu bionic/universe amd64 node-validate-npm-package-license all 3.0.1...ously unselected package node-validate-npm-package-license. Prepari...ubuntu1) ... Setting up node-validate-npm-package-license (3.0.1-1)...

    1569 days ago

  • Basic docker commands !

    ...ssues Operating system: linux Perl executable at: /usr/bin/perl Please check manual. Usage: autoConTAMPR.pl --validate/-v autoConTAMPR.pl --validate/-v --conf/-c autoConT...

    1525 days ago

  • Install quast using conda !

    (JitMetaENV) ➜ ~ conda install -c bioconda quast Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version...

    1231 days ago

  • Perl script to check perl modules and download NCBI, BUSCO, Taonomy, Silva databases !

    ...y ($inst) = ExtUtils::Installed->new(); my (@installed_modules) = $inst->modules(); for ( @import_modules ) { eval{ $inst->validate($_) }; if($@) {...

    1176 days ago

  • Write bash in perl script !

    ...y ($inst) = ExtUtils::Installed->new(); my (@installed_modules) = $inst->modules(); for ( @import_modules ) { eval{ $inst->validate($_) }; if($@) {...

    1174 days ago

  • Perl script to check modules installed !

    ...y ($inst) = ExtUtils::Installed->new(); my (@installed_modules) = $inst->modules(); for ( @import_modules ) { eval{ $inst->validate($_) }; if($@) {...

    1171 days ago

  • Bash script for getopts

    #using : after a switch variable means it requires some input (ie, t: requires something after t to validate while h requires nothing. while getopts “ht:r:p:v” OPTION do case $...

    965 days ago