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Useful Publications and Websites for Deep Sequencing Data Analysis
Global overview papers Next generation quantitative genetics in plan...t [equally relevant to animal and microbial systems] Sense from sequ...uake: quality-aware detection and correction of sequencing erro...gene of interest] Detecting and annotating genetic variations using the HugeSeq pipe...3779 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation software/too...nage SNPs under more flexible and useful settings. If you need...om/p/proteinevolver/QMSim QTL and Marker Simulator http://www.a...ence data with user-specified disease and quantitative trait models...forge.net/cookbook/simucomplexdiseasesimuPOP simuPOP is a general-p...3737 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workbench - de novo and reference assembly of Sanger, Roche FLX, Illumina, Helicos, and SOLiD data. Commercial next-g...SOCS is built on an iterative variation of the Rabin-Karp strin...ack to the reference genomes, and carry out post-analysis. ZOOM...3519 days ago
Apps for Busy Bioinformatics Researchers !!!
...p that allows for the opening and analysis of DNA sequencing files - ab1. It includes handy tools such as "Reverse Complement"...o web services access to SGD, and then for even more details provid...ion/structure information and disease associations from PMD, OMIM a...3541 days ago
Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics Workbench - de novo and reference assembly of Sanger, Roche FLX, Illumina, Helicos, and SOLiD data. Commercial next-g...ent suffix tree library, seed-and-extend alignment, SNP detecti...ap layout paradigm. By D. Hernandez, P. François, L. Far...3243 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
Commercial tools Strand NGS offers many different tools includi...M, BAM or Illumina-specific ELAND format can be directly imported for...na, Ion Torrent, 454 (Roche), and Pac Bio DNA-Seq Feature, can annot...supported: The 454 FLX System and the 454 GS Junior System from Roche...2909 days ago
Worldwide funding agencies to fund your bioinformatics research !!
...y or bigtime biology project. And other disciplines, of course. Alexander von Humboldt Foundation:&nb...earch involves cardiovascular disease and stroke, with funding...ead this scientific knowledge and train the next generation of scie...treatment of children’s diseases, particularly research that...2938 days ago
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