Circoletto: visualizing sequence similarity with Circos
...ation tool based on Circos, which provides a fast, aesthetically pleasing and informative overview of sequence similarity search results. Online version and downloadable software pac...2275 days ago
circosJS: d3 library to build circular graphs
Circos is a javascript library to easily build interactive graphs in a circular layout. It's based on d3.js. It aims to be a javascript version of the Circos software. You should consider using Circos to show: relationships between entities periodical data2271 days ago
MMseqs2.0: ultra fast and sensitive protein search and clustering suite
...to search and cluster huge protein sequence sets. MMseqs2 is open source GPL-licensed software implemented in C++ for Linux, MacOS, and (as beta version, via cygwin) Windows. The sof...2234 days ago
2213 days ago
D-GENIES: A tool for Dotplot large Genomes in an Interactive, Efficient and Simple way
...designed to compare two genomes. It supports large genome and you can interact with the dot plot to improve the visualisation. We use minimap version 2 to align the two genomes. T...2153 days ago
SOAP2 : Short Oligonucleotide Analysis Package 2
SOAPaligner/soap2 is a member of the SOAP (Short Oligonucleotide Analysis Package). It is an updated version of SOAP software for short oligonucleotide alignment. The new program feat...2172 days ago
SALSA: A tool to scaffold long read assemblies with Hi-C
...caffold your assemblies using Hi-C data. This version implements some improvements...l SALSA algorithm. If you want to use the old version, it can be found in the old_s...need Python 2.7, BOOST libraries and Networkx(version lower than 1.2). If you co...2149 days ago
NAViGaTOR: Network Analysis, Visualization and Graphing Toronto
...– Network Analysis, Visualization, & Graphing TORonto is a software system for scaleable visualizing and analyzing networks. The current version, NAViGaTOR 3, increases modul...2131 days ago
2081 days ago
FRODOCK 2.0: fast protein–protein docking server
frodock: a user-friendly protein–protein docking server based on an improved version of FRODOCK that includes a complementary knowledge-based potential. The web interface p...2025 days ago