Results for "Visualisation"
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Smash: An alignment-free method to find and visualise rearrangements between pairs of DNA sequences
...The detection is based on conditional exclusive compression, namely using a FCM (Markov model), of high context order (typically 20). For visualisation, Smash outputs a SVG ima...2931 days ago
IONiseR: tools for the quality assessment of data produced by Oxford Nanopore’s MinION sequencer
...and rapidly developing technology. It is not clear what will be most informative. We hope that IONiseR will provide a framework for visualisation of metrics that we haven&rsqu...2355 days ago
Genome assembly stats plotting
...abular and cumulative length plots, and introduces an additional circular plot that summarises most commonly used assembly metrics in a single visualisation. Each of these presentations...2258 days ago
D-GENIES: A tool for Dotplot large Genomes in an Interactive, Efficient and Simple way
...Simple way – is an online tool designed to compare two genomes. It supports large genome and you can interact with the dot plot to improve the visualisation. We use minimap version 2...2155 days ago
SeqMonk:A tool to visualise and analyse high throughput mapped sequence data
SeqMonk is a program to enable the visualisation and analysis of mapped sequence data. It was written for use w...from mapped data (BAM/SAM/bowtie etc) Creation of data groups for visualisation and analysis Visualisation o...2063 days ago
BlobToolKit: A toolkit for genome assembly QC
...onents: BlobToolKit Viewer allows browser-based interactive visualisation and filtering of preliminary...es and generating a BlobDir dataset with BlobTools2, ready for visualisation in the Viewer. Paper&...1535 days ago
chromatiblock: Scalable, whole-genome visualisation of structural changes in prokaryotes
To create a fresh environment for chromatiblock to run in do: conda create --name chromatiblock conda activate chromatiblock conda install chromatiblock --channel conda...1351 days ago
- ...7 Proteomics 18 Sequence analysis 2 Statistics and machine learning 8 Transcriptomics 23 Variant Analysis 8 Visualisation 2
1225 days ago
- ...tion behind machine learning approaches. Using unsupervised learning to cluster and visualise data points Dimension reduction techniques for visualisation and as input to clustering me...
969 days ago
Comparative genomics visualisation tools !
Comparative genomics visualisation tools !808 days ago
