Results for "Whole genome re-sequencing"
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Resolving the complexity of the human genome using single-molecule sequencing
The human genome is arguably the most complete mammalian reference assembly yet more t...completion. The results in this paper https://www.genomeweb.com/sequencing/team-uses-s...ference suggest a greater complexity of the human genome in the...3219 days ago
- HapSolo, that identifies secondary contigs and defines a primary assembly based on multiple pairwise contig alignment metrics. HapSolo evaluates candidate primary assembli...
1091 days ago
Simons Genome Diversity Project
Complete genome sequences from more than one hundred diverse human populations All genomes in the dataset were sequenced to at least 30x coverage using I...esearchers eliminated bias of alleles toward matching the human genome refere...1091 days ago
Algorithms for DNA Sequencing (course offered each month)
"We will learn computational methods -- algorithms and data structures -- for analyzing DNA sequencing data. We w...e Python to implement key algorithms and data structures and to analyze real genomes and D...3205 days ago
Alignment of closely related whole genomes/scaffolds
With the relative ease and low cost of current generation sequencing te...increase in the number of sequenced genomes for species across the tree...s that can quickly compare multiple whole-genome sequences, millions of base p...een created to report new tools for whole genome alignm...3017 days ago
- MAKER is a portable and easily configurable genome annotation pipeline.Its purpose is to allow smaller eukaryotic and prokaryotic genome projects to independently annotate their genomes and to create genome databa...
3008 days ago
- Assessing genome assembly and annotation completeness with Benchmarking Universal Single-Copy Orthologs More at http://busco.ezlab.org/
3008 days ago
- RATT is software to transfer annotation from a reference (annotated) genome to an unannotated query genome. It was first developed to transfer annotations between different genome assembly versions. Howeve...
3008 days ago
- Pilon is a software tool which can be used to: Automatically improve draft assembli...on Pilon requires as input a FASTA file of the genome along with one or more BAM fi...sis to identify inconsistencies between the input genome and th...
3007 days ago
- Tools to create plots showing N-statistics for genome assemblies More at https://github.com/dentearl/n50PlottingTools
3007 days ago
