Best book Titles for Learning Bionformatics
Nothing can add to our intellect more than reading a book. I...lishers Bioinformatics: From Genomes to Drugs, Thomas Lengauer (E...iv Press Neural Networks and Genome Informatics, Cathy H. Wu, Jer...yer, 2002, Benjamin/Cummings Genomes, Terence A. Brown, 2002, Joh...3919 days ago
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Bioinformatics and Sequencing Courses and Workshops
Swiss Institute of Bioinformatics (SIB) organises lots of bioinformatics courses covering wide range of topics: http://www.isb-sib.ch/education/training-courses.html Can...3908 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...uencing errors. Kelley et al, Genome Biol 11(11):R116, 2010. PubM...ent de novo assembly of large genomes using compressed data struct...software package] Comparing genomes and assemblies; variant dete...High-throughput genotyping by whole-genome resequencing. Huang et...3781 days ago
List of bioinformatics open source projects/software.
Open source software is software that can be freely used, changed, and shared (in modified or unmodified fo...nformation about biological sequences collected from the environment. GenomeSpace http://www.genomespace.o...3758 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...on test bed for hypotheses of genome evolution http://acb.qfab.org...ts/gametes/?source=navbarGASP Genometric Analysis Simulation Progr...NOME A rapid coalescent-based whole genome simulator http://www.sp...s/gensim/GWAsimulator A rapid whole genome simulation program http...3739 days ago
Perl one-liner for bioinformatician !!!
With the emergence of NGS technologies, and sequencing data most of the bioinformaticians mung and wrangle around.../genomics-array.blogspot.in/2010/11/some-unixperl-oneliners-for.html http://genomespot.bl...3630 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis..., rtracklayer, GenomicFeatures and BSgenome. Compared to the IRange...or SNP analysis: snpMatrix BSgenome BSgenome provides an object...the biomaRt, IRanges, Biostrings, BSgenome, GO.db...3626 days ago
Commercial and public next-gen-seq (NGS) software
...ment of Nucleotide Databases. Whole genome alignments to a referen...modular system for the rapid whole genome alignment of finished o...na reads to a FASTA reference genome. By Andrew D. Smith and Zheny...ALLPATHS: De novo assembly of whole-genome shotgun microreads. ALL...3520 days ago
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