Commercial and public next-gen-seq (NGS) software
...ludes SNP detection, CHiP-seq, browser and other features. Commercial. Windows, Mac OS X and Linux.Galaxy -...cussion thread here. Written by Ben Langmead and Cole Trapnell. Linux, Windows, and Mac OS X. BWA - Heng Lee...3517 days ago
Software packages for next gen sequence analysis
...ludes SNP detection, CHiP-seq, browser and other features. Commercial. Windows, Mac OS X and Linux. * Galaxy...cussion thread here. Written by Ben Langmead and Cole Trapnell. Linux, Windows, and Mac OS X. * BWA - Heng L...3241 days ago
2712 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...nd Roche 454) and project types Available on Windows, Mac OS X, Linux, and the Ama...; and Illumina® platforms.” runs on Windows, free-standing multi-applicat...Linux based and Mac computers (not tested in windows) Input: BAM files Output: V...2907 days ago
Genome Assembly Tools and Software - PART1 !!
...Sequence Assembly & Alignment CodonCode Aligner is a program for sequence assembly, contig editing, and mutation detection, available for Windows and Mac OS X. Aligner is comp...2684 days ago
Perl Special Vars Quick Reference
...%^H Internaluse only: Useful to implement scoped pragmas. ${^TAINT} Taint mode read-only flag. ${^WIN32_SLOPPY_STAT} If true on Windows stat() won't try to...2643 days ago
2488 days ago
PerlOneLiner for Bioinformatician
...trip whitespace from the beginning and end of each lineperl -ple 's/^[ \t]+|[ \t]+$//g' # Convert UNIX newlines to DOS/Windows newlinesperl -pe 's|\n|\r\n|' # Convert DOS/Windows newlines to UNIX newlinesperl...2301 days ago
Ancestral sequence reconstruction steps !
...tree-based groups. 4.3- RDP4 for download and installation on Windows in "http://web.cbio.uct.ac.za/~darren/rdp.html" 4.4- Hyphy (Mac, Windows, Linux) in "http://hyphy.org/...2178 days ago