Many-Core Engine (MCE) for Perl example
...and bank-tellers the parallel workers. MCE enhances that model b...stream to the next available worker. CORE MODULES Three modul...e engine to enable queuing to work for both children (spawned fr...allows 3 options; :manager, :worker, and :getter. REQUIREMEN...2648 days ago
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RITA: Rapid identification of high-confidence taxonomic assignments for metagenomic data
...constitute the highest-confidence set. Sequences not classified in this manner are subjected to a series of downstream classification steps. This work has been accepted for publica...2348 days ago
CAMSA :: a tool for Comparative Analysis and Merging of Scaffold Assemblies
...brary under the MIT license. Main features: works with any number of scaffold...n-progressive fashion allows to simultaneously work with scaffold assemblies obta...scaffold assembly provides an interactive framework for a visual comparative anal...2317 days ago
MUMmer4: A fast and versatile genome alignment system
...t offers improved speed through parallel processing of input query sequences. With a theoretical limit on the input size of 141Tbp, MUMmer4 can now work with input sequences of any b...2280 days ago
ALPACA: A hybrid strategy for assembly of genomic DNA shotgun sequencing reads.
ALPACA requires Celera Assembler 8.3 or later. It is recommended to build Celera Assembler from source. (Why? The pre-built binaries CA_8.3rc1 and CA8.3rc2 will work for any large data set. Detail paper at https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-017-3927-82194 days ago
MITObim - mitochondrial baiting and iterative mapping
...e MITObim pipeline described in Hahn et al. 2013. The full article can be found here. Kindly cite the article if you are using MITObim in your work. The pipeline was originally...2186 days ago
SEX-DETector: A Probabilistic Approach to Study Sex Chromosomes in Non-Model Organisms
...progeny of each sex) to infer autosomal and sex-linked genes (genes located on the non recombining part of sex chromosomes). How does SEX-DETector work? SEX-DETector does not requi...2164 days ago
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