Install BLAST in Ubuntu/Linux and Window !
#On ubuntu sudo apt-get install ncbi-blast+ #Ubuntu Conda installation conda install -c bioconda blast #...-blast-2.7.1+-win64.exe with your web browser. #If that FTP links does not work, t...1145 days ago
2915 days ago
Retrieve NCBI GenBank records with a range of accession numbers
#!/usr/bin/perl #FILE: ncbi_search.pl #AUTH: Paul Stothard (paul.stothard@gmail...=> 5, help => undef ); Getopt::Long::Configure('bundling'); GetOptions( 'q|query=s' => \$...2914 days ago
Install ATOM editor on Elemantory OS / Ubuntu
#Download ATOM deb file from https://atom.io/ https://atom.io/download/deb (bas...view. Run `apm help ` to see the more details about a specific command. Options: --color Enable col...1174 days ago
2702 days ago
2691 days ago
Create genome scaffolding with Perl
...S ./psl_scaffolder.pl -query [options] =cut sub min {...DVHBXN-/TGCAARYSWKMHBDVXN-/; # work on masked sequences as well...gram starts here # set default options my @pslFiles = (); my $proj...a good likelihood that this will work ## i.e. trimLength * (1-%id...2306 days ago
2149 days ago
2124 days ago
Install Parrot Virtual Machine !
...............done. auto::isreg - Does your C library have a working S_ISREG..........yes. aut...t@jit-HP-Pro-3335-MT:~/Downloads/parrot-8.1.0$ ./parrot -h parrot [Options] [] Options: -h --help -V --ver...1535 days ago