A Brief Bioinformatics Tutorial
...s to investigate the function of a protein. i.e. finding interactors, co-expressed genes, see a phylogene...g all the three parts, we will use the S. cerevisiae VPS36 protein as an example.3652 days ago
Next generation sequencing(NGS) books
Employing different technologies, the purpose of NGS platform is to decode the identity or modification on the nucleotides. NGS platforms evolve quickly and capture the main stream. This bookmark is created to provide NGS online books links.3643 days ago
Bioinformatician’s Pocket Reference !!
...nt code snippets to build our own custom workflows, and thus keeping syntax at our fingertips has become essential.Although Google is best way to get syntax problem solved, it is not a b...3634 days ago
Ten recommendations for creating usable bioinformatics command line software
Bioinformatics software varies greatly in quality. In terms of usability, the command line interface is the first experience a user will have of a tool. Unfortunately, this is ofte...3634 days ago
Orione – a web-based framework for NGS analysis in microbiology
...these limitations researchers at CRS4, Italy have developed Orione, a Galaxy-based framework consisting o...able research software and specifically designed pipelines to build complex, reproducible workflows for N...3589 days ago
COSMOS, our workflow management system for NGS data
COSMOS, our Python-based management system for implementing large-scale parallel workflows focusing on, but not restricted to, large-scale short-read "NGS" sequencin...3589 days ago
3573 days ago
Swabs to Genomes: A Comprehensive Workflow
...is of microbial genomes, once a painstaking and expensive undertaking, has becom...r DNA library preparation and sequencing, and inexperience with bioinformatics c...sroom with limited resources and bioinformatics experience to perform it.3571 days ago
Java utilities for Next Generation Sequencing by Pierre Lindenbaum
Java utilities for Bioinformatics https://github.com/lindenb/jvarkit3534 days ago