Tools for Searching Repeats And Palindromic Sequences
...es ( see Reassociation Kinetics Experiments, and C-Value Paradox ). These sequences were later...e are duplications of more complex 100-200 base sequences.Segmen...etection methods this number is expected to increase. On the ot...e same in either direction. For example, a sequence of 5' GAATTC...2226 days ago
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Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
...symbols as a input. GeneSCF supports more organisms from V1.1. Examples to download database as simple text file using GeneSCF "prepare_... Requirement: GeneSCF only works on Linux system, it has been successfu...2886 days ago
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Genome Assembly Tools and Software - PART1 !!
...aired-end read LinkAge MaxBin 2.2 – Binning Assemb...nd the functionality of Firefox BinPacker 1.1 – Pa...sufficiently deep, roughly 30X for a given transcript. Rnnot...n error-prone regions, while extending paire-end read into lo...2700 days ago
Source Code and Pseudo Code !!
...n terms of the actions to be executed and the order in which those actions are to be executed. An algorithm is merely...ust cite an abstraction. Examples: 1. If student's grad...equal to ten input the next exam result if the st...E. NO SENTENCES. No flower boxes (discussed ahead) in your p...2673 days ago
Perl Special Vars Quick Reference
...ARGV The command-line args. Regular Expressions $<digit> Regexp parenthetical capture holder...t for named submatches. $^R Last regexp (?{code}) result. ${^RE...g'?) %! Error number hash $^E Extended Operating System Error...2659 days ago
Quick next generation sequencing (NGS) terms definition
...nds span within an interval [δmin,δmax]. Most (>90%) of paired-en...can be mapped to the reference genome as “expected”: (a) mapped to o...is also referred to as depth of coverage. It is expected that the number of read...2537 days ago