51 days ago
Severus: a somatic structural variation (SV) caller for long reads
...SV) caller for long reads (both PacBio and ONT). It is designed for matching tumor/normal analysis, supports multiple tumor samples, and produces accurate and complete somatic and germ...47 days ago
MIKE: an ultrafast, assembly-, and alignment-free approach for phylogenetic tree construction
...etic tree, incorporating 238 yeast, 303 Zea, 141 Ficus, 67 Oryza, and 43 Saccharum spontaneum samples. MIKE demonstrated accurate performance across varying ev...39 days ago
ContigExtender: a new approach to improving de novo sequence assembly for viral metagenomics data
...Extender employs a novel recursive Overlap Layout Candidates (r-OLC) strategy that explores multiple extending paths to achieve longer and highly accurate contigs. ContigExtender is ef...9 days ago