Results for "adapter"
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Comment on "Installing Porechop on Ubuntu !"
...asta1,634,477 reads loaded Looking for known adapter sets10,000 / 10,000 (100.0%)...P006 80.0 82.6 SQK-MAP006 Short 76.9 76.0 PCR adapters 1 82.6 78.3 PCR tail 1 76.7...80.8 Barcode 96 (forward) 79.2 76.0 Trimming adapters from read ends SQK-NSK007_Y_...2112 days ago
- ...exa”), SolexaQA now also supports Ion Torrent and 454 data. Trim galore! Trim_galore is a wrapper script to automate quality and adapter trimming as well as quality c...
2144 days ago
Comment on "Software packages for next gen sequence analysis"
Thanks for the useful list. I found this CUTADAPT useful. It searches for the adapter in all reads and removes it when it finds it.http://cutadapt.readthedocs.org/en/stable/guide.html3072 days ago
Comment on "List of popular bioinformatics software/tools"
skewer (transferred from https://sourceforge.net/projects/skewer) implements the bit-masked k-difference matching algorithm dedicated to the task of adapter trimming and it is specially designed for processing next-generation sequencing (NGS) paired-end sequences. https://github.com/relipmoc/skewer3579 days ago
