Results for "aligner"
Top-level pages
Commercial and public next-gen-seq (NGS) software
...wtie - Ultrafast, memory-efficient short read aligner. It aligns short DNA sequence.... (published in BMC Bioinformatics)Short read aligner called Bowtie (http://bowtie-...es using the ultra high-throughput short read aligner Bowtie, and then analyzes the...3532 days ago
Software packages for next gen sequence analysis
...ry Merriman at UCLA. * Bowtie - Ultrafast, memory-efficient short read aligner. It aligns short DNA sequence...to mammalian-sized genomes using the ultra high-throughput short read aligner Bowtie, and then analyzes the...3256 days ago
Genome Assembly Tools and Software - PART1 !!
...transcripts, currently supporting Blat and Exonerate contig-to-genome aligners. It identifies novel splicin...genome sequences from whole genome shotgun(WGS) reads. CodonCode Aligner 6.0.2 – DNA Sequence As...2699 days ago
Some useful Bioinformatics links
...counts.zoho.eu/signin?servicename=ZohoProjects&serviceurl=https%3A%2F%2Fprojects.zoho.eu%2Fportal%2Favaga2 lh3/minimap2: A versatile pairwise aligner for genomic and spliced nucle...2255 days ago
Frequent parameters for bioinformatics tools !
...“MINLEN:20” “TOPHRED33” Filtlong --min_length 500 --min_mean_q 85 --min_window_q 65 FastQ Screen --aligner bowtie2' (bwa for PacBio) --...1299 days ago
