Comment on "GraphMap - A highly sensitive and accurate mapper for long, error-prone reads"
...th end-to-end extension. Uses Myers' global alignment to align between anchors. anchorgotoh - anchored alignment with Gotoh. Uses Gotoh global alignment to align between anchors. [anchor] -w, --approach STR...2305 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
Thanks for such an informative blog. I notice MCScan is missing. MCScan is an algorithm able to scan multiple genomes or subgenomes in order to identify putative homologous chromosomal regions, and align these regions using genes as anchors. More at http://www.ncbi.nlm.nih.gov/pubmed/222176003686 days ago