Results for "annotations"
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Public Databases for Bioinformatics !
...papers, and other highly processed data here /mnt/data/ globally accessible data should store common data here e.g. genomes and indexes, annotations, ENCODE data if you dont w...1144 days ago
Integrative Genomics Viewer (IGV) tutorial
...w several types of data files involved in any NGS analysis that employs a reference genome, including how reads from a dataset are mapped, gene annotations, and predicted genetic varian...3590 days ago
7th International Conference on Bioinformatics and Computational Biology (BICoB)
...gene networks. Computational Proteomics: Filtering and indexing sequence databases, Peptide quantification and identification, Genome annotations via mass spectrometry, Identi...3504 days ago
- ...dentifies repeats, aligns ESTs and proteins to a genome, produces ab-initio gene predictions and automatically synthesizes these data into gene annotations having evidence-based quality...
3015 days ago
- ...to an unannotated query genome. It was first developed to transfer annotations between different genome assembly versions. However, it can also transfer annotations between strains and even diff...
3015 days ago
- flo - same species annotations lift over pipeline Lift over is the process of transferring annotations from one genome assembly to a...ome assembly for the species and good quality annotations (maybe manually curated or ex...
3012 days ago
- ...ge of 5~kb distance from their known locations. Finally, we predict centromere coordinates for six yeast species that currently lack centromere annotations. These results suggest that C...
3010 days ago
- Database to Database Conversions db2db allows for conversions of identifiers from one database to other database identifiers or annotations. To use db2db select the input type of your...
2899 days ago
BLAST Ring Image Generator (BRIG)
...and file parsing automatically via a simple GUI. Contig boundaries and read coverage can be displayed for draft genomes; customized graphs and annotations can be displayed. Using a us...2779 days ago
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm)
...ifferent: Prodigal performs well even in high GC genomes, with over a 90% perfect match (5'+3') to the Pseudomonas aeruginosa curated annotations. Metagenomic Version: Prodig...2689 days ago
