Results for "assembling"
Top-level pages
Useful Publications and Websites for Deep Sequencing Data Analysis
.... Catchen et al., G3: Genes, Genomes, Genetics, 1:171-182, 2011. Full Text, Home Page Rainbow: an integrated tool for efficient clustering and assembling RAD-seq reads. Chong et al, B...3794 days ago
Commercial and public next-gen-seq (NGS) software
...gned for very short reads. The single-processor version is useful for assembling genomes up to 40-50 Mbases in...size. The parallel version is implemented using MPI and is capable of assembling larger genomes. By Simpson JT...3533 days ago
Software packages for next gen sequence analysis
...gned for very short reads. The single-processor version is useful for assembling genomes up to 40-50 Mbases in...size. The parallel version is implemented using MPI and is capable of assembling larger genomes. By Simpson JT...3257 days ago
Genome Assembly Tools and Software - PART1 !!
...insight into microbial communities. However, assembling metagenomic datasets has prov...mbler based on a de Bruijn graph, capable of assembling a human genome on a desktop c...e which integrates individual assemblers for assembling metagenomic short sequencing...2700 days ago
- ...file with untrusted contigs Pipeline options: --only-error-correction runs only read error correction (without assembling) --only-assembler runs only assembling (without read error correctio...
2366 days ago
Gap filling or Contigs extensions tools !
...ch_type=entities I could be wrong, but the above answers to your hypothetical scenario appear to miss the point that you aren't interested in assembling the full genome, just the 100...2180 days ago
Bioinformatics tools for genome assembly !
...assembler optimized for short-read sequencing data. SOAPdenovo: A de Bruijn graph-based assembler designed for short reads, widely used for assembling large and complex genomes....301 days ago
