Results for "big data"
Top-level pages
Best book Titles for Learning Bionformatics
Nothing can add to our intellect m...l: A Guide to Common Tools and Databases, Scott Markel, Darryl Le...001, Jones & Bartlett Pub Data Analysis and Classification f...tern Discovery in Biomolecular Data: Tools, Techniques, and Appli...of Gene Expression Microarray Data, T. P. Speed (Editor), 2003,...3933 days ago
Most Commonly used Awk by Bioinformatician
Awk is a programming language that is specifically designed for quickly manipulating space delimited data. Although you can achieve all...3927 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
Global overview papers Next gene...842, 2010. Publisher Website Data quality assessment, filtering...m massively parallel sequence data. Gnerre et al, PNAS 108(4): 1...expressed genes from RNA-seq data. Wang et al., Bioinformatics....toring and searching sequence data in the cloud. OConnor et al,...3795 days ago
List of bioinformatics open source projects/software.
...ttps://github.com/biorails a data management system designed to...vironment caArray https://cabig-stage.nci.nih.gov/community/to...xploration of diverse genomic data IntAct http://www.ebi.ac.uk..., visualisation solutions for big data in the genomic era T-REX...3772 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation softwa...n size reductions from allele data frequencies http://www.ensam....ed model intended to simulate datasets under a very broad range...that simulates sequence-like data over large genomic regions in...osition of typical metagenome data sets http://ab.inf.uni-tuebin...3752 days ago
List of In-silico Binding Site Prediction Tools
...cket.uchicago.edu/fpop/) is a database of the protein functional...odelling.leeds.ac.uk/sb/ is a database of known ligand binding s...query protein to members of a database of protein 3D structures...ween surfaces from coordinate data supplied in a PDB file. MSPo...3759 days ago
Linux for bioinformatician !!!
Linux, free operating system for computers, provides several powerful admin tools a...to manage your systems effectively and handle huge amount of genomic/biological data with an ease. The field of bi...3720 days ago
Perl one-liner for bioinformatician !!!
With the emergence of NGS technologies, and sequencing data most of the bioinformaticians mung and wrangle around massive amounts of genomics text. There are several "standardized" file formats...3643 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis, some of them are as...nd information and annotation data. Documentation Motif...AM formatted binary alignment data. SAM/BAM is quickly becoming...ing sample code uses the test data set from the above BayesPeak...3640 days ago
Commercial and public next-gen-seq (NGS) software
...short sequences to a sequence database, such as the human refere...Illumina, SOLiD and Roche-FLX data formats and allows the user t...n a graph form that retains ambiguities, such as those arising f...ser/Alignment Viewer/Assembly Database EagleView - An informatio...3534 days ago
