List of bioinformatics open source projects/software.
...vement. Followings are the OS bioinformatics projects/software : .NET Bio http://blogs.msdn.com/b/msr_...e of automated docking tools Biochemical Algorithms Library (B...anscription, and Translation BioHaskell http://biohaskell.org...p data with information about biological sequences collected from the...3757 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...mcoal/FastSLINK Simulation of Marker and Phenotype Data in Pedi...sim/GeneArtisan Simulation of Markers in Case-Control Study Design...ome simulation program http://biostat.mc.vanderbilt.edu/wiki/main/...tudy the evolution of genetic markers, life history traits, and ph...ulation dynamics https://bcrc.bio.umass...3737 days ago
List of In-silico Binding Site Prediction Tools
Following are the list of In-silico Binding Site Prediction in...ins tools CASTp : http://sts.bioengr.uic.edu/castp/ Comp...is a gold-standard dataset of biologically relevant binding sit...t of Computational and System Biology at the University of Pitt...ond webserver, MAPPIS (http://bioinfo3d...3744 days ago
Next generation sequencing in R or bioconductor environment
...some of them are as follows Biostrings The Biostrings package from Bioconductor provides an advanced...thm extends the popular motif discov...ucture for interacting with a Biostring based genome sequence. BSgeno...rs. The package leverages the biomaRt, IRanges, Biostrings, BSgenome,...3625 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workbench - de novo and re...an at CSHL. (published in BMC Bioinformatics). POSIX OS require...d Ewan Birney at the European Bioinf...of Illumina reads SNP/Indel Discovery ssahaSNP - ssahaSNP is a poly...arnation of the PolyBayes SNP discovery tool developed by Gabor Marth...3519 days ago
Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics Workbench - de novo and...uence. Developed with Applied Biosystem's colourspace genomic r...itute (EMBL-EBI). SNP/Indel Discov...arnation of the PolyBayes SNP discovery tool developed by Gabor Marth...Sequence Reads. Authors are Fabio De Bona, Stephan Ossowski, Korbinia...3242 days ago
Binding Site Prediction in Protein !
The interaction between proteins and other molecules is fundamental to all biological functions...2202 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...ng, imputation of ungenotyped markers, and identity-by-descent...ng, imputation of ungenotyped markers, and identity-by-descent seg...s machine learning model with biology and statistics to predict no...tution or indel has impact on biological function of the protein; &ld...2909 days ago
Worldwide funding agencies to fund your bioinformatics research !!
Are you seeking funding for research or training in a particula...eral and applied science. BD Biosciences: BD Biosciences...derrecognized and underfunded biomedical fields are the main re...environment of creativity and discov...al models, gene therapy, neurobiology and development of the basal ga...2938 days ago
Tools for Searching Repeats And Palindromic Sequences
What are genomic interspersed repeats? In the mid 1960's scientists discovered that many...d 180°), still reads CGAAGC. The European Molecular Biolog...s providing the EMBOSS tools, for example: Wageningen Bioinform...2211 days ago