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Results for "calculation"

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• • Poonam Mahapatra@poonam

  

  https://www.ncbi.nlm.nih.gov/Class/NAWBIS/Modules/Phylogenetics/phylo12.html #P-distance #Distance #Calculation #Sequences #Align

  Tags: P, Distance, Calculation, Sequences, Align

  2204 days ago

• • Jit@jit.aber

  

  The Distance Calculation Formula https://www.cut-the-knot.org/pythagoras/DistanceFormula.shtml #Distance #Calculation #Formula

  Tags: Distance, Calculation, Formula

  1676 days ago

• • Jit@jit.aber

  

  Gepard: allows the calculation of dotplots even for large sequences like chromosomes or bacterial genomes

  Gepard (German: "cheetah", Backronym for "GEnome PAir - Rapid Dotter") allows the calculation of dotplots even for large sequences like chromosomes or bacterial genomes. Reference: Krumsiek J, Arnold R, Rattei T. Gepard: A rapid and sensitive tool for creating dotplots on genome scale. Bioinforma...

  Tags: Gepard, calculation, dotplots, sequences, chromosomes, bacterial, genomes

  1706 days ago

• • Jit@jit.aber

  

  mosdepth: fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing

  mosdepth can output: per-base depth about 2x as fast samtools depth--about 25 minutes of CPU time for a 30X genome.mean per-window depth given a window size--as would be used for CNV calling.the mean per-region given a BED file of regions.a distribution of proportion of bases covered at or above...

  Tags: mosdepth, fast, BAM, CRAM, depth, calculation, WGS, exome, target, sequencing

  1624 days ago