2633 days ago
SeqMule: Automated human exome/genome variants detection
SeqMule takes single-end or paird-end FASTQ or BAM files, generates a script consisting of more than 10 popular al...wnloading databases. SeqMule can be used for both Mendelian disease study and cancer gen...2614 days ago
Enrichr: a comprehensive gene set enrichment analysis
Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide experiments. Here we present a significant update to one of the tools in this dom...2564 days ago
2356 days ago
Computational Genomics: Applied Comparative Genomics
The primary goal of the course is for students to be grounded in theory and leave the course empowered to conduct...mp; analysis, gene expression & regulation, personal genome analysis, and cancer gen...2348 days ago
Reference-free prediction of rearrangement breakpoint reads
lideSort-BPR ( b reak p oint r eads) is based on a fast algorithm for all-against-al...rrectly with no false-positive reads. Moreover, evaluation on a real prostate cancer dat...2249 days ago
2167 days ago
REVIGO: Reduced Visualize gene ontology
REViGO can take long lists of Gene Ontology terms and summarize them by removing redundant GO terms. The remaining terms can be visualized in semantic similarity-based sc...2104 days ago
KOBAS: a web server for gene/protein functional annotation and functional gene set enrichment
KOBAS 3.0 is a web server for gene/protein functional...(Annotate module) and functional gene set enrichment(Enrichment module). For Annotate module,...bout pathways, diseases, and Gene Ontology. For Enrichment module, it can accept either...2023 days ago
Platypus: A Haplotype-Based Variant Caller For Next Generation Sequence Data
Platypus is a tool designed for efficient and accurate variant-detection in high-throughput sequencing data....ts, and is being used in clinical sequencing trials in the Mainstreaming Cancer Gen...2018 days ago