Results for "chromosomal"
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Software developed in pevsner lab
...a pediSNP: Analyze SNP Data From a Pedigree of Two Generations kcoeff: Calculate Cotterman Coefficients of SNP Genotype Data triPOD: Detects chromosomal abnormalities in parent-child...3499 days ago
RACA: Reference-Assisted Chromosome Assembly
...e-Assisted Chromosome Assembly (RACA), an algorithm to reliably order and orient sequence scaffolds generated by NGS and assemblers into longer chromosomal fragments using comparative g...2951 days ago
Smash: An alignment-free method to find and visualise rearrangements between pairs of DNA sequences
...l- and large-scale. Nevertheless is more directed to large-scale since that the main aim of the research is to know where the large-scale [chromosomal by chromosome] of several pri...2931 days ago
Nemo – A stochastic, individual-base, genetically explicit simulation platform
A recombination map has been added for all multi-locus traits. The map positions (chromosomal) for neutral markers (e.g. SNPs) and loci under selection (QTLs, deleterious...2773 days ago
- ...luding numerical and structural chromosomal aberrations. Currently, sever...py number aberrations (CNAs) of chromosomal segments in tumor genomes. Ho...ystematically detect structural chromosomal aberrations by virtue of the...llects the genomic locations of chromosomal CNA-associated breaks that we...
2154 days ago
- ...ll line linking the genes CYTH1 and EIF3H. While it has been found in the transcriptome previously, genome sequencing did not identify a direct chromosomal fusion between these two gene...
2753 days ago
BIMA V3: an aligner customized for mate pair library sequencing
Summary: Mate pair library sequencing is an effective and economical method for detecting genomic structural variants and chromosomal abnormalities. Unfortunately, the mapping and align...2699 days ago
- MCscan is a computer program that can simultaneously scan multiple genomes to identify homologous chromosomal regions and subsequently align these regions using genes as anchors. This i...
2691 days ago
- ...ers can input data into J-Circos using flat data formats, as well as from the GUI. J-Circos will enable biologists to better study more complex chromosomal interactions and fusion trans...
2634 days ago
- ...with or without other annotation. PhenoGram allows for annotation of chromosomal locations and/or regions with...r text. PhenoGram also allows for creation of plots showing expanded chromosomal locations, providing a way to...
2616 days ago
