Results for "comparing"
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...nteresting where they are covering the common algorithms underlying the following fundamental topics in bioinformatics: assembling genomes, comparing DNA and protein sequences, pr...3959 days ago
- ...he impact such an event may have on the organism. ChromEvol implements a series of likelihood models for the evolution of chromosome numbers. By comparing the fit of the different mode...
3403 days ago
- ...com>Citation (from within R, enter citation("clusterProfiler")):Yu G, Wang L, Han Y and He Q (2012). “clusterProfiler: an R package for comparing biological themes among gene...
2894 days ago
- ...taxonomic classification of metagenomic high-throughput sequencing reads. Each read is directly assigned to a taxon within the NCBI taxonomy by comparing it to a reference database co...
2883 days ago
- ...used on analytical tasks like performing upper-quantile normalization on expression data or convert genome wide gene expression to z-scores when comparing expression data from differen...
2881 days ago
- ...variants are reported allowing one to pinpoint areas that were potentially mis-assembled, or to compare the quality of different assemblies. For comparing multiple assemblies of the sa...
2797 days ago
- ...the MEME Suite provides tools for scanning sequences for matches to motifs (FIMO, MAST and GLAM2Scan), scanning for clusters of motifs (MCAST), comparing motifs to known motifs (Tomto...
2704 days ago
- ...s or inter-strains. In addition, it can also show other sequence features like repeat sequence distributions in one whole-genome DNA sequence by comparing the genome to itself.It is a...
2648 days ago
- ...a 3D environment, we are able to compactly display cross-sequence comparisons. This provides the user with a novel platform for visualizing and comparing genomic feature organization....
2648 days ago
- ...ences and/or similarities in gene content between related organisms. Comparing SNPs and indels between closely-related strains or serovars. Comparing gene expression values across...
2520 days ago
