WhatsHap: fast and accurate read-based phasing
...accurate read-based phasing) Works well with Illumina, PacBio, Oxford Nanopore and other types of reads It phases SNVs, indels and even “complex” variants (such as ...2182 days ago
2082 days ago
QUAST-LG: Versatile genome assembly evaluation
...o assemblies against reference sequences and computes relevant quality metrics. Since genomes generally cannot be reconstructed completely due to complex repeat patterns and low cover...2032 days ago
2012 days ago
GWASpro: A High-Performance Genome-Wide Association Analysis Server
GWASpro supports building complex design matrices, by which complex experimental designs that may include replications, treatments, locations and times, can be accounted for in the linear mixed mode...1989 days ago
1954 days ago
Osprey: Network Visualization System
Osprey is a software platform for the visualization of complex biological interaction networks. Osprey builds data-rich graphical representations from Gene Ontology (GO) ann...1945 days ago
LRSDAY: Long-read Sequencing Data Analysis for Yeasts
Long-read sequencing technologies have become increasingly popular in genome projects due to their strengths in resolving complex genomic regions. As a leading model organism with sma...1727 days ago
1579 days ago
Nextflow: Data-driven computational pipelines
...s the adaptation of pipelines written in the most common scripting languages. Its fluent DSL simplifies the implementation and the deployment of complex parallel and reactive workflo...1549 days ago