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Results for "concordant reads"

Wire posts

• • Jit@jit.aber

  

  Human genome reads http://www.bcgsc.ca/downloads/btl/ntedit/paper/human/ #human #genome #reads #data

  1894 days ago

• • Abhimanyu Singh@abhimanyu

  

  long #Pacbio sequence reads to #assemble a #bacterial genome, including correcting the assembly with short Illumina reads. http://sepsis-omics.github.io/tutorials/modules/cmdline_assembly/

  1851 days ago

• • Jit@jit.aber

  

  Get the secondary hists reads count from SAM awk '{ print $2 }' out.sam| grep "2048" | wc -l #SAM #BAM #Secondary #Hits

  1834 days ago

• • BioJoker@biojoker

  

  Genome Mapping #OneLiner https://bioinformaticsonline.com/snippets/view/39310/one-liner-for-reads-mapping

  1825 days ago

• • Abhimanyu Singh@abhimanyu

  

  ELECTOR: EvaLuator of Error Correction Tools for lOng Reads https://github.com/kamimrcht/ELECTOR #ELECTOR #Evaluation #Correction #Error #Evaluator

  1792 days ago

• • Jit@jit.aber

  

  Nanopore sequencing and #assembly of a human genome with ultra-long reads https://www.nature.com/articles/nbt.4060

  1776 days ago

• • LEGE@lege

  

  #Estimate the #insert #size with mapped reads $ head -10000 mappings.sam | awk '{ if ($9 > 0) { N+=1; S+=$9; S2+=$9*$9 }} END { M=S/N; print "n="N", mean="M", stdev="sqrt ((S2-M*M*N)/(N-1))}'

  1620 days ago

• • Jit@jit.aber

  

  #Improving draft #assemblies by iterative mapping and #assembly of short reads to eliminate #gaps https://genomebiology.biomedcentral.com/articles/10.1186/gb-2010-11-4-r41

  1551 days ago

• • LEGE@lege

  

  Minimizer-space de Bruijn graphs: Whole-genome assembly of long reads in minutes on a personal computer https://www.cell.com/cell-systems/fulltext/S2405-4712(21)00332-X #msDBG #Assembly #Genome

  959 days ago

• • BioStar@biostar

  

  #HAIRSPLITTER: SEPARATING NOISY LONG READS INTO AN UNKNOWN NUMBER OF #HAPLOTYPES https://hal-insa-rennes.archives-ouvertes.fr/hal-03817928/

  538 days ago

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