Results for "construct"
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...DNA.3.Identify the masking of the end of the read with the quality score B or # as done by CASAVA and adjust the probabilities in this region.4.Construct an assembled sequence between...2671 days ago
- ...tiple genomes as map "anchors." Given K genomes, the steps in the map construction are as follows: For eac...-vs-all comparison with alignments being performed in protein space. Construct a graph with each vertex corr...
2657 days ago
Synteny Portal: a web-based application portal for synteny block analysis
Synteny Portal, a versatile web-based application portal for constructing, visualizing and browsing synteny blocks. With Synteny Portal, users can easily (i) construct synteny blocks among multiple...2550 days ago
EvidentialGene: tr2aacds, mRNA Transcript Assembly Software
...matics project, "Evidence Directed Gene Construction for Eukaryotes", to construct high quality, accurate gene s...//arthropods.eugenes.org/EvidentialGene/Construction refers to the combination...d any other, to annotate and score gene constructions. Over-produced constructi...2201 days ago
- ...reads to contigs and scaffolds. Instead of using single-end reads to construct contig, PERGA uses paired-end...from O ≥ Omax to Omin to resolve the gaps and branches. Moreover, by constructing a decision model using mac...
2173 days ago
NovoGraph: building whole genome graphs from long-read-based de novo assemblies
NovoGraph: building whole genome graphs from long-read-based de novo assemblies An algorithmically novel approach to construct a genome graph representation of long-read-based de...2010 days ago
- GeNeCK (Gene Network Construction Kit) is a comprehensive onlin...e various statistical methods to construct gene networks based on gene e...ene information. It efficiently constructs gene networks from expressio...tion for gene regulatory network construction. It can be accessed at&nbs...
1949 days ago
RePS: Repeat-masked Phrap with scaffolding, a WGS sequence assembler
...sembly. The established software Phrap is used to compute meaningful error probabilities for each base. Clone-end-pairing information is used to construct scaffolds that order and orie...1595 days ago
NextDenovo: string graph-based de novo assembler for TGS long reads
...tCorrect and NextGraph. NextCorrect can be used to correct TGS long reads with approximately 15% sequencing errors, and NextGraph can be used to construct a string graph with corrected...1594 days ago
VCF2PopTree: a client-side software to construct population phylogeny from genome-wide SNPs
...if the input file size is small. CITATION: Subramanian, S., Ramasamy, U. and Chen, D. (2019). VCF2PopTree: a client-side software to construct population phylogeny from gen...874 days ago
