Results for "counts"
Bio-Scripts
...anel of normals for read-count denoising DenoiseReadCounts (BETA Tool) Denoises read counts to produce denoised copy rati...erence NonNFastaSize (Picard) Counts the number of non-N bases in...2079 days ago
Perl script to create a consensus of nucleotide sequences !
...sort {$b $a} map {length} @mi; # set w to the length of the longest element foreach my $j ( 0 .. $w-1 ){ # Initialize the base counts. my %h = ( a=>0, t=>...2036 days ago
Tadpole is 250x faster than SPADes assembler !
..., 2018 Description: Uses kmer counts to assemble contigs, extend s...mp= Write kmers and their counts. fastadump=t Write k...pass as kmer counts. Much faster but counts will...Error correct via kmer counts. reassemble=t If ecc...980 days ago
Perl script for chi-squared test !
...################################# # Perform chi-squared test ############################################################ # need total of all counts in both sequences, plus total...415 days ago
Perl script to parse VCF file !
...e); print "Total entries: ", scalar(@vcf_entries), "\n"; print "---------------------------\n"; my %chromosome_counts; for my $entry (@vcf_entries) { $chromosome_counts{$entry->{CHROM}}++; } pri...98 days ago
