Results for "data compression"
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Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is an iOS app that allows for the...teractions, COSMIC mutations, and CNV data for cell lines. Does not require a network connection for local databases. View and search PubMed...ed, Genomic Variations and many other databases t...3537 days ago
- Pathway Analysis is usually performed with aim to enrich the genes with...omics, transcriptomics and proteomics data, interactions between genes i...ation in one of the pathway knowledge databases (KEGG,Reactome,Panther,B...c/Pathways_2014_Module2.pdf Impotant Database an...
3492 days ago
A guide for complete R beginners !
This tutorial is intended to introduce users quickly to the basics of R, focusing on...ted script to perform again and again on different data Disadvantages Lack...ation (Optional) Download and save the tutorial data set fr...3357 days ago
Software packages for next gen sequence analysis
...Illumina, SOLiD and Roche FLX data. Uses a novel Condensation As...short sequences to a sequence database, such as the human refere...functions to handle ABI SOLiD data. Written by Heng Li from the.... Supports Illumina and SOLiD data. De novo Align/Assemble * AB...nding sites based on ChIP-Seq data. (C++)...3238 days ago
Comprehensive list of visualization tools for biological pathways
The study of biological pathways is a key to understand the diff...one leading method in -omics data analysis and visualization....work targeted at biomolecular data. Visualization of interdepend...bsp; Visualizing multi-omics data in metabolic networks https:...ronment composed of a central database an...2283 days ago
- Reformat is a member of the BBMap/BBTools package. It is a multipurpose tool designed for converting reads or other nucleotide data between different formats. It...rleaved files It is multithreaded and can process data at ove...
2710 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
Commercial tools Strand NGS offers many different tools in...other aligners Aligns exome data and performs variant calling...BED, Agilent files, NimbleGen data summary files, VCF files, Imp...om high-throughput sequencing datasets; calls variants found in...”; no actual expression data used,...2904 days ago
- ...sh; find all instances of file using indexed database built from the updatedb c...pports regular expressions Compression tar cf file....tar.gz files — create a tar with Gzip compression tar xzf fil...
2870 days ago
- Bash Script source: https://gist.github.com/santhilalsubhash/367befcf5216be4b1fd9 Information: This s....txt) Note: You can download GTF files from http://www.ensembl.org/info/data/ftp/in...
2102 days ago
- alignment: the mapping of a raw sequence read to a location with...ressed format for storing SAM data. BCF Format: Binary call for...ressed format for storing VCF data. CIGAR String: Compact Idios...rmat for storing raw sequence data. For example, the FASTA file...des multiple elements of meta-data regard...
2865 days ago
