Results for "data visualization"
Top-level pages
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is an iOS app that allows for the...teractions, COSMIC mutations, and CNV data for cell lines. Does not require a network connection for local databases. View and search PubMed...ed, Genomic Variations and many other databases to...3539 days ago
- Pathway Analysis is usually performed with aim to enrich the genes with...omics, transcriptomics and proteomics data, interactions between genes i...ation in one of the pathway knowledge databases (KEGG,Reactome,Panther,B...c/Pathways_2014_Module2.pdf Impotant Database and...
3493 days ago
A guide for complete R beginners !
This tutorial is intended to introduce users quickly to the basics of R, focusing on...ted script to perform again and again on different data Disadvantages Lack...ation (Optional) Download and save the tutorial data set from...3359 days ago
Software packages for next gen sequence analysis
...or Next Generation Sequencing data analysis. * JMP Genomics - Next gen visualization and statistics tool.... Supports Illumina and SOLiD data. De novo Align/Assemble * ABySS - Ass...sed application for alignment visualization, browsing and analysis of gen...3240 days ago
Comprehensive list of visualization tools for biological pathways
...one leading method in -omics data analysis and visualization. Following are the comprehensive list of visualization tools for biological...wer KEGG-based pathway visualization tool for complex high-through...ronment composed of a central database and a visual editor, built around...2284 days ago
- Reformat is a member of the BBMap/BBTools package. It is a multipurpose tool designed for converting reads or other nucleotide data between different formats. It...rleaved files It is multithreaded and can process data at over...
2711 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...BED, Agilent files, NimbleGen data summary files, VCF files, Impute2 GWAS...om high-throughput sequencing datasets; calls variants found in <.05%...type, LOG.txt, also generates visualization DeNovoGear Descriptio...”; no actual expression data used, only in silico expression; &ldqu...2906 days ago
- Bash Script source: https://gist.github.com/santhilalsubhash/367befcf5216be4b1fd9 Information: This s....txt) Note: You can download GTF files from http://www.ensembl.org/info/data/ftp/inde...
2104 days ago
- alignment: the mapping of a raw sequence read to a location with...ressed format for storing SAM data. BCF Format: Binary call for...ressed format for storing VCF data. CIGAR String: Compact Idios...rmat for storing raw sequence data. For example, the FASTA file...des multiple elements of meta-data regardin...
2866 days ago
Genome Assembly Tools and Software - PART1 !!
...ory saving and convenience of data inquiry, high-throughput short reads data is always initially formatted...ide Assembler for Metagenomic Data SFA-SPA is a suffix array based sho...Generation Sequence Assembly Visualization Tablet is a lightweight, h...2683 days ago
