MyPro: A seamless pipeline for automated prokaryotic genome assembly and annotation
MyPro is an improved genomics software pipeline for prokaryotic genomes. MyPro is use...ndly and requires minimal programming skills. High-quality prokaryotic genome assembly and annotation can be obtaine...2720 days ago
e-RGA: enhanced Reference Guided Assembly of Complex Genomes
Next Generation Sequencing has totally changed genomics: w...problems have become even more difficult, de novo assembly being on top of this list. De...ropose a novel method that aims to improve de novo assembly in the presence of a closely...2716 days ago
GARM:Genome Assembly, Reconciliation and Merging
The pipeline is based mainly implemented using Perl scripts and modules and third-party open source software like the AMOS (Myers et al., 2000) and MUMmer (Kurtz et al.,...2716 days ago
MeGAMerge: A tool to merge assembled contigs, long reads from metagenomic sequencing runs
MeGAMerge MeGAMerge (A tool to merge assembled contigs, l...produce an improved contig set based on OLC based assembly. All overlap parameters (Mini...to $binpath in the tool: Newbler (specifically runAssembly)Minimus2 (part of AMOS, also...2716 days ago
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