Results for "denovo sequencing"
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CNIDARIA: fast, reference-free phylogenomic clustering
Motivation: Identification of biological specimens is a major requirement for a range of applications. Reference-free methods analyse unprocessed sequencing data without relying on prior...2892 days ago
- SAMtools: Primer / Tutorial by Ethan Cerami, Ph.D.keywords: samtools, next-gen, next-generation, sequencing, bowtie, sam, bam, primer, tu...
2886 days ago
- Reads simulator Wgsim is a small tool for simulating sequence reads from...INDEL) polymorphisms, and simulate reads with uniform substitution sequencing errors. It does not generate INDEL sequencing errors, but this can be partl...
2886 days ago
- _A5-miseq_ is a pipeline for assembling DNA sequence data generated on the Illumina sequencing platform. This README will ta...
2830 days ago
- Kaiju is a program for the taxonomic classification of metagenomic high-throughput sequencing reads. Each read is directly...
2882 days ago
- FQC is software that facilitates quality control of FASTQ files by carrying out a QC...metrics into an interactive dashboard designed to richly summarize individual sequencing runs. The dashboard groups sa...
1285 days ago
- Microbiome analysis using a single application MEGAN6 is a comprehensive toolbox fo...you to work with hundreds of samples containing hundreds of millions of sequencing reads. Blast-like analysis ca...
2854 days ago
- Genome STRiP (Genome STRucture In Populations) is a...vering and genotyping structural variations using sequencing data. The methods are designe...heterogeneous data sets, including variations in sequencing depth, read lengths and mixtu...
2811 days ago
- Recent technological progress has greatly facilitated de novo genome sequencing. However, de novo a...
2824 days ago
- Redundans pipeline assists an assembly of heterozyg...embled contigs, paired-end and/or mate pairs sequencing libraries and returns&nb...to-medium size genomes flexible toward many sequencing technologies (Illumina, 454 o...
2816 days ago
